Hi Epiphany,
KFLOP doesn't have differential outputs for its Step/Dir Generators. If you need differential outputs you would need to add external differential drivers. Low cost 3rd Party modules can do this. They would be the same modules that convert single ended encoder to differential line drivers signals.
But you might use KFLOP's single ended open collector mode in Quadrature mode as you mentioned. The drive permits up to 100KHz cycles (400K quadrature counts per second in that mode). Is that fast enough to handle your top speed?
Regards