In other words, my problem can be broken down into two questions.
1. How do I change the way the exported g-code is numbered? For example if I want to change the current way ( N1-9999 )... to (N1-XXXXX), five digits instead of four.
2. When I upload the code onto mach3 it only sees the first N1-4790 lines of code. MOST of my codes require more than 10,000 lines of code. Therfore I need to be able to upload atleast that much.