Joey,
I also write all my g-code and use cutter radius comp all the time w/o any problems. Only two things to be aware of. First, make certain to not use right when you need left. I know that sounds like a no-brainer, but trust me, there's a good reason I point this out. Second, you have to provide adequate lead in. I don't remember the minimum. I always allow a bit more than the dia. of the cutting tool. Practice on wax if you have any, else on wood.