Okay I may have figured this out, just the instructions are really hard to follow for newbie, I didnt understand the lead screw term, just figured that it refers to the lead screws in the mill which are metric and not inch and for every full turn of the axis wheel it will yield to 1mm.
So that puts me on the 5647.0588 okay I think I may have figured out the rest... the only thing I need to figure out is what would be a good start off aceleration point for the servo motors is a there a rule of thumb ?