Hi toolbag33,
I assume you meant to say bit numbers and not pins.
Please avoid switching input pins directly to +5V. Even though it shouldn't cause damage it should be avoided.
When the switch opens it will leave the pin unconnected and floating so it will be in an indeterminate state. A pull up or down resistor is needed.
You might consider using the first 8 inputs on JP4 or JP6 which have pull down resistors and switch them to 3.3V
KFLOP IO default to being inputs. There is no need to configure them as inputs.
Regards